Volume
@proceedings{BiCOB2019,
title = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
year = {2019}}
Papers
@inproceedings{BiCOB2019:HPC_BLAST_Distributed_BLAST,
author = {Shane Sawyer and Mitchel Horton and Chad Burdyshaw and Glenn Brook and Bhanu Rekapalli},
title = {HPC-BLAST: Distributed BLAST for Modern HPC Clusters.},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {/publications/paper/BxHL},
doi = {10.29007/qm7h},
pages = {1-14},
year = {2019}}
@inproceedings{BiCOB2019:gcn.MOPS_Accelerating_cn.MOPS_with,
author = {Mohammad Alkhamis and Amirali Baniasadi},
title = {gcn.MOPS: Accelerating cn.MOPS with GPU},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {/publications/paper/t6bD},
doi = {10.29007/hb5r},
pages = {15-26},
year = {2019}}
@inproceedings{BiCOB2019:Identifying_DNA_Sequence_Motifs,
author = {Hassan Aldarwish and David Keller and Elena Harris},
title = {Identifying DNA Sequence Motifs of Pdx-1 and NeuroD1 Transcription Factors},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {/publications/paper/W7XF},
doi = {10.29007/sfxr},
pages = {27-35},
year = {2019}}
@inproceedings{BiCOB2019:DALIGNER_Performance_Evaluation_Intel,
author = {Evaldo Costa and Gabriel Silva and Marcello Teixeira},
title = {DALIGNER Performance Evaluation on Intel Xeon Phi Architecture},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {/publications/paper/Qdtd},
doi = {10.29007/j5cs},
pages = {36-47},
year = {2019}}
@inproceedings{BiCOB2019:Enrichment_Method_Mapping_Ambiguous,
author = {Yuan Liu and Yongchao Ma and Evan Salsman and Frank Manthey and Elias Elias and Xuehui Li and Changhui Yan},
title = {An Enrichment Method For Mapping Ambiguous Reads To Reference Genome For NGS Analysis},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {/publications/paper/xH29},
doi = {10.29007/kw3c},
pages = {48-54},
year = {2019}}
@inproceedings{BiCOB2019:Comparison_Type_I_Interferon,
author = {Zifeng Liang},
title = {Comparison of Type I Interferon Expression in Adult and Neonatal Mice during Respiratory Viral Infection},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {/publications/paper/hSFC},
doi = {10.29007/ltkw},
pages = {55-64},
year = {2019}}
@inproceedings{BiCOB2019:Understand_Effective_Coverage_Mapped,
author = {Shanshan Gao and Quang Tran and Vinhthuy Phan},
title = {Understand Effective Coverage by Mapped Reads using Genome Repeat Complexity},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {/publications/paper/7cBK},
doi = {10.29007/krbn},
pages = {65-73},
year = {2019}}
@inproceedings{BiCOB2019:Polygraph_Data_Structure_Genome,
author = {Masaki Fujimoto and Cole Lyman and Mark Clement},
title = {The Polygraph: A Data Structure for Genome Alignment and Variation Detection},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {/publications/paper/3rmK},
doi = {10.29007/txxd},
pages = {74-83},
year = {2019}}
@inproceedings{BiCOB2019:Improving_Classification_with_CNNs,
author = {Allison Rossetto and Wenjin Zhou},
title = {Improving Classification with CNNs using Wavelet Pooling with Nesterov-Accelerated Adam},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {/publications/paper/6Mbb},
doi = {10.29007/9c5j},
pages = {84-93},
year = {2019}}
@inproceedings{BiCOB2019:Predicting_high_cost_patients,
author = {Isabella Eigner and Freimut Bodendorf and Nilmini Wickramasinghe},
title = {Predicting high-cost patients by Machine Learning: A case study in an Australian private hospital group},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {/publications/paper/pZqS},
doi = {10.29007/jw6h},
pages = {94-103},
year = {2019}}
@inproceedings{BiCOB2019:New_Look_at_Codon,
author = {Gabriel Wright and Anabel Rodriguez and Patricia Clark and Scott Emrich},
title = {A New Look at Codon Usage and Protein Expression},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {/publications/paper/z77C},
doi = {10.29007/d4tz},
pages = {104-112},
year = {2019}}
@inproceedings{BiCOB2019:Prediction_MoRFs_Based_n,
author = {Fang Chun and Yoshitaka Moriwaki and Caihong Li and Kentaro Shimizu},
title = {Prediction of MoRFs Based on n-gram Convolutional Neural Network},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {/publications/paper/ZSlw},
doi = {10.29007/5k4z},
pages = {113-119},
year = {2019}}
@inproceedings{BiCOB2019:Robust_Fuzzy_Cluster_Ensemble,
author = {Yan Yan and Tin Nguyen and Bobby Bryant and Frederick C. Harris},
title = {Robust Fuzzy Cluster Ensemble on Cancer Gene Expression Data},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {/publications/paper/TnB6},
doi = {10.29007/38sk},
pages = {120-128},
year = {2019}}
@inproceedings{BiCOB2019:SVM_Model_Candidate_Y,
author = {Wageesha Rasanjana and Sandun Rajapaksa and Indika Perera and Dulani Meedeniya},
title = {A SVM Model for Candidate Y-chromosome Gene Discovery in Prostate Cancer},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {/publications/paper/nV39},
doi = {10.29007/3nzw},
pages = {129-138},
year = {2019}}
@inproceedings{BiCOB2019:Colorectal_Cancer_Outcome_Prediction,
author = {Xingzhi Yue and Neofytos Dimitriou and Peter Caie and David Harrison and Ognjen Arandjelovic},
title = {Colorectal Cancer Outcome Prediction from H&E Whole Slide Images using Machine Learning and Automatically Inferred Phenotype Profiles},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {/publications/paper/M7NT},
doi = {10.29007/n912},
pages = {139-149},
year = {2019}}
@inproceedings{BiCOB2019:Petri_nets_ODE_as,
author = {Daria Kogut and Kaja Gutowska and Aleksandra Poterała-Hejmo and Jarosław Śmieja and Dorota Formanowicz and Piotr Formanowicz},
title = {Petri nets and ODE as complementary tools in analysis of signaling pathways},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {/publications/paper/kNR1},
doi = {10.29007/542h},
pages = {150-160},
year = {2019}}
@inproceedings{BiCOB2019:Equipping_Decoy_Generation_Algorithms,
author = {Ahmed Bin Zaman and Amarda Shehu},
title = {Equipping Decoy Generation Algorithms for Template-free Protein Structure Prediction with Maps of the Protein Conformation Space},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {/publications/paper/Vcvg},
doi = {10.29007/j5p9},
pages = {161-169},
year = {2019}}
@inproceedings{BiCOB2019:Statistical_Analysis_GLCM_Texture,
author = {Abia Khan and Kavery Nivana Theethira Poonacha and Adrian Britt and Benjamin McSweeney and Nicolette Santos and Grace Donovan and Valerie Yurk and Tara Scully},
title = {Statistical Analysis of GLCM Texture Features and Microstructures in SEM Images of Crassostrea virginica Exposed to Atrazine},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {/publications/paper/QZqg},
doi = {10.29007/59bk},
pages = {170-180},
year = {2019}}
@inproceedings{BiCOB2019:Connecting_Molecular_Energy_Landscape,
author = {Kazi Lutful Kabir and Nasrin Akhter and Amarda Shehu},
title = {Connecting Molecular Energy Landscape Analysis with Markov Model-based Analysis of Equilibrium Structural Dynamics},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {/publications/paper/nv7M},
doi = {10.29007/tmgc},
pages = {181-189},
year = {2019}}
@inproceedings{BiCOB2019:Prediction_Novel_Pirna_Rat,
author = {Tamer Aldwairi and Federico Hoffmann and Andy Perkins},
title = {Prediction Of Novel Pirna Rat Clusters Based On Mouse Pirna Clusters Using Downstream and Upstream Analysis},
booktitle = {Proceedings of 11th International Conference on Bioinformatics and Computational Biology},
editor = {Oliver Eulenstein and Hisham Al-Mubaid and Qin Ding},
series = {EPiC Series in Computing},
volume = {60},
publisher = {EasyChair},
bibsource = {EasyChair, https://easychair.org},
issn = {2398-7340},
url = {/publications/paper/h3mb},
doi = {10.29007/zwxg},
pages = {190-199},
year = {2019}}
